Get nearby interactions for enhancer regions near promoters

Source: R/utils.R

Get nearby interactions for enhancer regions near promoters

nearby_interactions(enhancer_regions, promoters, max.dist = 20000)

Arguments

enhancer_regions

A GRanges object of enhancer regions

promoters

A GRanges object of promoters

max.dist

Max distance between enhancer regions and promoters (default: 20kb)

Value

A GRanges object of nearby interactions