R/plots.R
plot_profile_strands.Rd
Plots DNase or ATAC profiles by strands of motif matches
plot_profile_strands( cuts, sites, mlen = ncol(cuts)/2 - 200, title = "", strand = c("both", "+", "-") )
Matrix of DNase or ATAC cuts
Data frame of candidate sites
Motif length
Title of the plot
if (FALSE) { plot_profile_strands(cuts, sites, title='Footprint profiles around binding sites') }